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OJBTM
Online Journal of Bioinformatics ©
Volume 17(3):159-167, 2016..
Homology modeling and
molecular dynamic ABC transporter1 anti-bacterial in Antheraea mylitta
Krishna Madipelli, P Nagaraja Rao.
Department
of Zoology, Osmania University, Hyderabad
ABSTRACT
Madipelli K, Rao PN.,
Homology modeling and molecular dynamic ABC transporter1 anti-bacterial in Antheraea mylitta Onl J Bioinform., 17(3):159-167, 2016... . Homology
modeling has significant potential for high throughput In silico screening. We describe a method for discovery of 3D
structures of anti-bacterial expressed proteins. A 3D model of ABC Transporter1 from Antheraea mylitta was generated using 1OXS as template and Modeller7v7
and optimized by Verify 3D and Procheck.
Flexible docking was performed with Sortase A using GOLD3.0.1 software.
Results suggested that ARG 157, THR115, LEU242 in Sortase A are amino acids
involved in docking and bonding.
Key
words: Antheraea mylitta,
Homology Modeling, ABC Transporter1, Docking.
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