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OJB©
Online
Journal of Bioinformatics©
Onl J Bioinform©
Established 1995
ISSN 1443-2250
Volume
25 (3) :130-146, 2024.
In silico cis-regulation
of DOF genes in Oryza sativa L.
rice.
Vikram Singh Gaur,
Vinay Kumar Singh, Anil Kumar, Soma S. Marla, U.S. Singh
Molecular Biology and Genetic Engineering, Pantnagar,
India
ABSTRACT
Gaur VS, Singh
VK, Kumar A, Marla SS, Singh US., In silico cis-regulatorion
of DOF genes in Oryza sativa
L. rice. Onl J Bioinform., 25 (3) :130-146,
2024. japonica rice genome sequence generated 36 genes models of Dof genes. To determine functions we performed in silico analysis of 1000bp upstream promoter Dof
transcription. Our classification led to 6 Dof gene
regulators in promoter region that control circadian rhythm, hormones, biotic
stress. We determined that motifs in promoters sequences of Dof genes Dof TFs
control expression of genes from germination to seed setting.
Key Words:
Rice, genome, DOF genes, cis-regulation.
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