MAIN


1996-2019. All Rights Reserved. Online Journal of Bioinformatics . You may not store these pages in any form except for your own personal use. All other usage or distribution is illegal under international copyright treaties. Permission to use any of these pages in any other way besides the  before mentioned must be gained in writing from the publisher. This article is exclusively copyrighted in its entirety to OJB publications. This article may be copied once but may not be, reproduced or  re-transmitted without the express permission of the editors. This journal satisfies the refereeing requirements (DEST) for the Higher Education Research Data Collection (Australia). Linking:To link to this page or any pages linking to this page you must link directly to this page only here rather than put up your own page.


OJBTM

 Online Journal of Bioinformatics  

Volume 11 (2): 282-292, 2010.


Building a topological inference with qualitative criteria to predict the structural family of a protein sequence.

 

 

Omar Gaci

 

 

Le Havre University, Le Havre France


ABSTRACT

 

Gaci O, Building a topological inference with qualitative criteria to predict the structural family of a protein sequence, Onl J Bioinform, 11 (2): 282-292, 2010The similarity between structural and topological properties were used to predict the structural family of a protein sequence. The method identified properties of the candidate families using sample proteins. Properties of the target sequence were compared to the corresponding properties of the families. Reliability was measured by comparing results to existing structural classifications. The method uses graphed proteins, where the vertices are amino acids, and the edges are interactions between them.

 

Key words: interaction network, protein structure, structural classification


MAIN

 

FULL-TEXT(SUBSCRIPTION OR PURCHASE TITLE $25USD)